Post-harvest treatment of wild-simulated ginseng under climate-smart environmental conditions
Solhee Kim, Taegon Kim, Jungyeon Kim, Kyo Suh
PLOS One (2025)
Post-harvest treatment of wild-simulated ginseng under climate-smart environmental conditions
Solhee Kim, Taegon Kim, Jungyeon Kim, Kyo Suh
PLOS One (2025)
Development of liquid chromatography/ultraviolet and evaporating light scattering detector platform for simultaneous quantification of ginsenosides
Inho Jung, Yujin Lee, Tae-Jin Yang, Kyoung Heon Kim, Jungyeon Kim
Journal of Chromatography A (2025)
Enhancing the persistence of engineered biotherapeutics in the gut: Adhesion, glycan metabolism, and environmental resistance
Yujin Lee, Hyun Gi Koh, Kyoung Heon Kim, Yong-Su Jin, Bong Hyun Sung, Jungyeon Kim
Advanced Drug Delivery Reviews (2025)
Integration of metabolomics and other omics: from microbes to microbiome
Daewon Go, Gun-Hwi Yeon, Soo Jin Park, Yujin Lee, Hyun Gi Koh, Hyunjin Koo, Kyoung Heon Kim, Yong-Su Jin, Bong Hyun Sung & Jungyeon Kim
Applied Microbiology and Biotechnology (2024)
Investigation of Bottleneck Enzyme Through Flux Balance Analysis to Improve Glycolic Acid Production in Escherichia coli
Jungyeon Kim, Ye-Bin Kim, Ju-Young Kim, Min-Ju Seo, Soo-Jin Yeom, Bong Hyun Sung
Journal of Microbiology (2024)
Systems Metabolic Engineering to Elucidate and Enhance Intestinal Metabolic Activities of Escherichia coli Nissle 1917
Jungyeon Kim, Gun-Hwi Yeon, Mi-Jin Kim, Jung-Hoon Bae, Jung-Hoon Sohn, Bong Hyun Sung
Journal of Agricultural and Food Chemistry (2024)
Biosynthesis of L-fucose and L-fuculose using engineered Saccharomyces cerevisiae. Process Biochemistry
Jungyeon Kim, Yu Eun Cheong, Sora Yu, Eun Ju Yun, Yong-Su Jin, Kyoung Heon Kim
Process Biochemistry (2023)
Microbiome engineering using probiotic yeast: Saccharomyces boulardii and the secreted human lysozyme lead to changes in the gut microbiome and metabolome of mice.
Jungyeon Kim, Christine Atkinson, Michael J Miller, Kyoung Heon Kim, Yong-Su Jin
Microbiology Spectrum (2023)
Oral administration of animal and plant protein mixture with Lactiplantibacillus plantarum IDCC 3501 improves protein digestibility.
Hyeonji Jeon, Hayoung Kim, Minjee Lee, Jinseok Moon, Jungyeon Kim, Jungwoo Yang, Younghoon Jung
Fermentation (2023)
Changes in the metabolome of probiotics during the stationary phase increase resistance to lyophilization.
Hyeon Ji Jeon‡, Jungyeon Kim‡ (co-first author), Woo Yeon Seok, Gwang-Seob Kim, Boyoung Choi, Minhye Shin, Ju-Hoon Lee, Younghoon Kim, Jungwoo Yang, Young Hoon Jung
Food Bioscience (2023)
L-Fucose is involved in human–gut microbiome interactions.
Jungyeon Kim, Yong-Su Jin, Kyoung Heon Kim
Applied Microbiology and Biotechnology (2023)
Lacticaseibacillus casei IDCC 3451 strengthen digestibility of plant-based proteins in mice.
Jungyeon Kim‡, Hayoung Kim‡ (co-first author), Hyeon Ji Jeon, Young Hoon Jung, and Jungwoo Yang
Probiotics and Antimicrobial Proteins (2023)
Increased amino acid absorption mediated by Lacticaseibacillus rhamnosus IDCC 3201 in high-protein diet-fed mice.
Hayoung Kim‡, Jungyeon Kim‡ (co-first author), Minjee Lee, Hyeon Ji Jeon, Jin Seok Moon, Young Hoon Jung, and Jungwoo Yang
Journal of Microbiology and Biotechnology (2023)
Elucidation of the fucose metabolism of probiotic Lactobacillus rhamnosus GG by metabolomic and flux balance analyses.
Yu Eun Cheong‡, Jungyeon Kim‡ (co-first author), Yong-Su Jin, Kyoung Heon Kim
Journal of Biotechnology (2022)
Enhanced production of 3, 4‐dihydroxybutyrate from xylose by engineered yeast via xylonate re‐assimilation under alkaline condition.
Takahiro Yukawa, Takahiro Bamba, Mami Matsuda, Takanobu Yoshida, Kentaro Inokuma, Jungyeon Kim, Jae Won Lee, Yong‐Su Jin, Akihiko Kondo, Tomohisa Hasunuma
Biotechnology and Bioengineering (2022)
Strain engineering and metabolic flux analysis of a probiotic yeast Saccharomyces boulardii for metabolizing L-fucose, a mammalian mucin component.
Jungyeon Kim, Yu Eun Cheong, Sora Yu, Yong-Su Jin, Kyoung Heon Kim
Microbial Cell Factories (2022)
Metabolic discrimination of synovial fluid between rheumatoid arthritis and osteoarthritis using gas chromatography/time-of-flight mass spectrometry.
Sooah Kim, Jiwon Hwang, Jungyeon Kim, Sun-Hee Lee, Yu Eun Cheong, Seulkee Lee, Kyoung Heon Kim, Hoon-Suk Cha
Metabolomics (2022)
Evaluation and optimization of quantitative analysis of cofactors from yeast by liquid chromatography/mass spectrometry.
Jungyeon Kim‡, Inho Jung‡, Yu Eun Cheong, Kyoung Heon Kim
Analytica Chimica Acta (2022)
Activation of ectopic olfactory receptor 544 induces GLP-1 secretion and regulates gut inflammation.
Chunyan Wu, Mi-Young Jeong, Jungyeon Kim, Giljae Lee, Ji-Sun Kim, Yu Eun Cheong, Hyena Kang, Chung Hwan Cho, Jimin Kim, Min Kyung Park, You Kyoung Shin, Kyoung Heon Kim, Geun Hee Seol, Seung Hoi Koo, Gwang Pyo Ko, Sung-Joon Lee
Gut Microbes (2021)
Engineering of Klebsiella oxytoca for the production of 2,3-butanediol from high concentration of xylose.
Ji Won Cha, Seung Hoon Jang, Jaewoo Son, Jungyeon Kim, Inho Jung, Kyoung Heon Kim, Yong Keun Chang, and Ki Jun Jeong
ACS Sustainable Chemistry & Engineering (2021)
Identification and improvement of volatile profiles of Allomyrina dichotoma larvae by fermentation with lactic acid bacteria.
Ha Eun Lee‡, Jungyeon Kim‡, Yeojin Kim‡ (co-first author), Won Yeong Bang, Jungwoo Yang, Sung-Joon Lee, Young Hoon Jung*
Food Bioscience (2021)
Development of a post-processing method to reduce the unique off-flavor of Allomyrina dichotoma: Yeast fermentation.
Jungyeon Kim‡, Ha Eun Lee‡ (co-first author), Yeojin Kim, Jungwoo Yang, Sung-Joon Lee, Young Hoon Jung*
LWT (2021)
Metabolomic elucidation of the effect of sucrose on the secondary metabolite profiles in Melissa officinalis by ultra-performance liquid chromatography-mass spectrometry.
Sooah Kim, Jungyeon Kim, Nahyun Kim, Dongho Lee, Hojoung Lee, Dong-Yup Lee*, Kyoung Heon Kim*
ACS Omega (2020)
Zmo0994, a novel LEA-like protein from Zymomonas mobilis, increases multi-Abiotic stress tolerance in Escherichia coli.
Jungwoo Yang, Ha Eun Kim, Young Hoon Jung, Jungyeon Kim, Do Hyoung Kim, Adrian R. Walmsley, Kyoung Heon Kim*
Biotechnology for Biofuels (2020)
Variation in the synovial fluid metabolome according to disease activity of rheumatoid arthritis.
Joong Kyong Ahn‡, Jungyeon Kim (co-first author)‡, Yu Eun Cheong, Kyoung Heon Kim*, Hoon-Suk Cha*
Clinical and Experimental Rheumatology (2020)
Systematic re-evaluation of the long-used standard protocol of urease-dependent metabolome sample preparation.
Jungyeon Kim, Joong Kyong Ahn, Yu Eun Cheong, Sung-Joon Lee, Hoon-Suk Cha*, Kyoung Heon Kim*
PLOS ONE (2020)
Intracellular metabolite profiling and the evaluation of metabolite extraction solvents for Clostridium carboxidivorans fermenting carbon monoxide.
Jungyeon Kim, Joongsuk Kim, Youngsoon Um*, Kyoung Heon Kim*
Process Biochemistry (2020)
Comprehensive genomic and transcriptomic analysis of polycyclic aromatic hydrocarbon degradation by a mycoremediation fungus, Dentipellis sp. KUC8613.
Hongjae Park, Byoungnam Min, Yeongseon Jang, Jungyeon Kim, Anna Lipzen, Aditi Sharma, Bill Andreopoulos, Jenifer Johnson, Robert Riley, Joseph W. Spatafora, Bernard Henrissat, Kyoung Heon Kim, Igor V. Grigoriev, Jae-Jin Kim, In-Geol Choi*
Applied Microbiology and Biotechnology (2019)
Metabolite profile changes and increased antioxidative and antiinflammatory activities of mixed vegetables after fermentation by Lactobacillus plantarum.
Jungyeon Kim, Kum-Boo Choi, Ju Hun Park, Kyoung Heon Kim*
PLOS ONE (2019)
Metabolomic and transcriptomic analyses of Escherichia coli for efficient fermentation of L-fucose.
Jungyeon Kim, Yu Eun Cheong, Inho Jung, Kyoung Heon Kim*
Marine Drugs (2019)
Potential metabolomic biomarkers for reliable diagnosis of Behcet’s disease using gas chromatography with time-of-flight mass spectrometry.
Joong Kyong Ahn‡, Jungyeon Kim (co-first author)‡, Jiwon Hwang, Juhwan Song, Kyoung Heon Kim*, Hoon-Suk Cha*
Joint Bone Spine (2018)
Metabolomic elucidation of the effects of media and carbon sources on fatty acid production by Yarrowia lipolytica.
Eun Ju Yun, James Lee, Do Hyoung Kim, Jungyeon Kim, Sooah Kim, Yong-Su Jin, Kyoung Heon Kim*
Journal of Biotechnology (2018)
Optimization of hexanoic acid production in recombinant Escherichia coli by precise flux rebalancing.
Seong Gyeong Kim, Sungho Jang, Jae Hyung Lim, Byoung Seung Jeon, Jungyeon Kim, Kyoung Heon Kim, Byoung-In Sang, Gyoo Yeol Jung
Bioresource Technology (2018)
Urinary metabolomic profiling to identify biomarkers for the diagnosis of Behcet’s disease by gas chromatography─time-of-flight-mass spectrometry.
Joong Kyong Ahn‡, Jungyeon Kim (co-first author)‡, Jiwon Hwang, Juhwan Song, Kyoung Heon Kim*, Hoon-Suk Cha*
International Journal of Molecular Sciences (2017)
Metabolite profiles of synovial fluid change with the radiographic severity of knee osteoarthritis.
Sooah Kim‡, Jiwon Hwang (co-first author)‡, Jungyeon Kim, Joong Kyong Ahn, Hoon-Suk Cha*, Kyoung Heon Kim*
Joint Bone Spine (2017)
Effects of minimal media vs. complex media on the metabolite profiles of Escherichia coli and Saccharomyces cerevisiae.
Jungyeon Kim, Kyoung Heon Kim*
Process Biochemistry (2017)
The water channel protein aquaporin 1 regulates cellular metabolism and competitive fitness in a global fungal pathogen Cryptococcus neoformans.
Gena Lee Meyers‡, Kwang-Woo Jung (co-first author)‡, Soohyun Bang, Jungyeon Kim, Sooah Kim, Joohyeon Hong, Eunji Cheong, Kyoung Heon Kim, Yong-Sun Bahn
Environmental Microbiology Reports (2017)
Enhanced production of 2,3-butanediol by engineered Saccharomyces cerevisiae through fine-tuning of pyruvate decarboxylase and NADH oxidase activities.
Jin-Woo Kim, Jungyeon Kim, Seung-Oh Seo, Kyoung Heon Kim, Yong-Su Jin, Jin-Ho Seo
Biotechnology for Biofuels (2016)
GC/TOF-MS-based metabolomic profiling in cultured fibroblast-like synoviocytes from rheumatoid arthritis.
Joong Kyong Ahn‡, Sooah Kim (co-first author) ‡, Jiwon Hwang, Jungyeon Kim, Kyoung Heon Kim (co-corresponding)*, Hoon-Suk Cha*
Joint Bone Spine (2016)
Enhanced butanol fermentation using metabolically engineered Clostridium acetobutylicum with ex situ recovery of butanol.
Sang-Hyun Lee, Sooah Kim, Jungyeon Kim, Nam Yong Cheong, Kyoung Heon Kim*
Bioresource Technology (2016)
Biomass, strain engineering, and fermentation processes for butanol production by solventogenic clostridia.
Sang-Hyun Lee, Eun Ju Yun, Jungyeon Kim, Sang Jun Lee, Youngsoon Um, Kyoung Heon Kim*
Applied Microbiology and Biotechnology (2016)
Elucidation of ethanol tolerance mechanisms in Saccharomyces cerevisiae by global metabolite profiling.
Sooah Kim, Jungyeon Kim, Ju Hwan Song, Young Hoon Jung, Il-Sup Choi, Wonja Choi, Yong-Cheol Park, Jin-Ho Seo, Kyoung Heon Kim*
Biotechnology Journal (2016)
Ex situ product recovery for enhanced butanol production by Clostridium beijerinckii.
Sang-Hyun Lee, Moon-Ho Eom, Jin-Dal-Rae Choi, Sooah Kim, Jungyeon Kim, Yong-An Shin, Kyoung Heon Kim*
Bioprocess and Biosystems Engineering (2016)
PHO13 deletion-induced transcriptional activation prevents sedoheptulose accumulation during xylose metabolism in engineered Saccharomyces cerevisiae.
Haiqing Xu‡, Sooah Kim (co-first author)‡, Hagit Sorek, Yongsuk Lee, Dukyeol Jeong, Jungyeon Kim, Eun Joong Oh, Eun Ju Yun, David E. Wemmer, Kyoung Heon Kim, Soo Rin Kim*, Yong-Su Jin*
Metabolic Engineering (2016)
Food metabolomics: from farm to human.
Sooah Kim, Jungyeon Kim, Eun Ju Yun, Kyoung Heon Kim*
Current Opinion in Biotechnology (2016)
Metabolomic elucidation of the effects of curcumin on fibroblast-like synoviocytes in rheumatoid arthritis.
Joong Kyong Ahn‡, Sooah Kim (co-first author)‡, Jiwon Hwang, Jungyeon Kim, You Sun Lee, Eun-Mi Koh, Kyoung Heon Kim (co-corresponding)*, Hoon-Suk Cha*
PLOS ONE (2015)
Ex situ product recovery and strain engineering of Clostridium acetobutylicum for enhanced production of butanol.
Sang-Hyun Lee, Moon-Ho Eom, Sooah Kim, Min-A Kwon, Jin-Dal-Rae Choi, Jungyeon Kim, Yong-An Shin, Kyoung Heon Kim*
Process Biochemistry (2015)
A new shuttle plasmid that stably replicates in Clostridium acetobutylicum.
Sang-Hyun Lee, Min-A Kwon, Sunhwa Choi, Sooah Kim, Jungyeon Kim, Yong-An Shin, Kyoung Heon Kim*
Journal of Microbiology and Biotechnology (2015)